PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009597248.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 321aa    MW: 36466.2 Da    PI: 7.2241
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009597248.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.27e-09171218455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_009597248.1 171 SHSLAERARREKISKKMKCLQDLVPGC----NKVIGKARMLDEIINYVQSLQ 218
                     8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.66E-6165222No hitNo description
SuperFamilySSF474599.68E-16165230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.786167217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-17167234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-6171218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-9173223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MLGCEEISIL ERQRAIFERL YQCQQQLSSL PNQNLAHFNS LISEHIMDCS QVQNFPIKID  60
PQLDESSRSL NMFGSEQKTW AGSDFANNSL ELAHQSLSTL SNSSMTKTST KKRKAEFYEE  120
DEYKARKIEG EAGEVKSEIT VKSAKENSKI SEVKKPDYIH VRARRGQATD SHSLAERARR  180
EKISKKMKCL QDLVPGCNKV IGKARMLDEI INYVQSLQKQ VEFLSMKLSA SNLNTDNLFA  240
KEFPSHMANF ANPACLQNNL FQQQRQEGSN VGVATMSPQR REDCLMSFPE AFLDSSHVPA  300
VHQLANFETD MQCLFGVHFQ Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754422e-62HG975442.1 Solanum pennellii chromosome ch03, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009597248.10.0PREDICTED: transcription factor BEE 2-like isoform X1
SwissprotQ93VJ46e-48BEE2_ARATH; Transcription factor BEE 2
TrEMBLM1C2731e-128M1C273_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000581691e-127(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40002142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36540.14e-48BR enhanced expression 2